Synthetic Cortex defines how thinking is structured, not what a model is trained on. It attaches to an existing language model and organises inference through parallel, specialised subsystems that all read from one shared neurochemical state. This page shows the pipeline as far as we publish it.
Tap any node. Solid lime lines carry the main signal, cyan lines carry emotional state, grey lines are internal hand-offs. Red nodes were closed by the agent that prepared this page. Dashed nodes are branches we have not disclosed yet.
Signal flowEmotional stateRedacted by agentUndisclosed branchScroll sideways on small screens →
The pipeline in words
Input streams arrive: conversation, letters and messages, behaviour, device state.
A relay stage routes them and pre-filters by salience.
Affect scoring places each input on valence, arousal and dominance.
The Limbic-2 engine updates thirteen coupled neurochemical channels; a mood space, an emotional trace memory, a hypothalamic body signal and a homeostatic regulator act on it.
Threshold gates translate the state into which processes fire.
Parallel layers run: spiking networks, layered memory, Manifold A ⇄ B, the perception network, the default mode network, associative recall, selective perception, self-space, metacognitive review, and one withheld layer.
Equalia and the deep layers stack inference seven levels deep each.
Hidden context synthesis gathers every channel into what the model sees; output steering and expert delegation feed it; sampling coupling is withheld.
The language model answers. The answer re-enters at affect scoring.
What is not shown
Closed on purpose.
Gate definitions, the conversion from affective coordinates to neurochemical levels, the coupling between state and generation parameters, the exact channel set of the hidden-context manager, and several modules in development are not published. The diagram is accurate in shape and deliberately incomplete in detail.
WhyThe value of the architecture is in its orchestration. The components are public science; the way they are wired together is not.
02 — How it differs
Not a prompt technique. Not a RAG pipeline. Not fine-tuning.
Most systems change what a model sees or what it has memorised. Synthetic Cortex changes the conditions under which it thinks.
Dimension
Prompted LLM
RAG pipeline
Fine-tuned model
Synthetic Cortex
Decides what the model sees
The prompt
Similarity to the query
Already in the weights
A neurochemical state, gates and associative recall
Reasoning starts
When asked
When asked
When asked
When an internal gate crosses its threshold
New knowledge lives
In the context window
In an external index
In changed weights
In layered memory, parallel spaces and hidden context (L2: latent space)
Base weights
Frozen
Frozen
Modified
Frozen
Retrieval timing
—
Once, before inference
—
Re-evaluated as inference evolves (L2) · emotion-weighted (M1)
Role of emotion
Tone, if any
None
Style learnt from data
Central regulator of priority, gating and consolidation
Forgetting
When the session ends
Rarely
Risk of catastrophic forgetting
Homeostatic, tier by tier, leaving traces
Explainability
Low
Cited sources
Low
Gates crossed, channels fired, per-module logs
From tokens to meaning
Pattern engineering, not prompt engineering.
Prompt engineering works on what the model observes at the surface. The cortex works one level down: on how the model relates, organises and navigates meanings it has already inferred. Tokens are entry points into that space, not the objects of reasoning.
Versus classic data science
Relations are designed, not just discovered.
A conventional data pipeline engineers features and lets correlations emerge from volume. Implicit relation engineering shapes the relational geometry itself — which concepts resonate, which decay — so new information lands in an existing network of meaning instead of being learnt from scratch.
Versus agent frameworks
Orchestration by state, not by script.
Agent frameworks route by rules and planners. Here the same input can fire different modules on different days, because routing depends on an evolving internal state with momentum, coupling and balance — closer to a regulated system than a flowchart.
03 — Research programme
Seven phases, one cumulative architecture.
Each phase addresses a specific limitation of current language models and adds a capability on top of the previous ones, without growing the core parameter count. Open any phase for its dossier.
PHASE 01
Emotional reasoning via neurochemical modelling
Neurochemical signals modelled mathematically and mapped onto continuous control variables that reshape inference.
Completed PHASE 02
Internal learning through dynamic adapters
Knowledge embedded during interaction while the base model stays frozen.
In research PHASE 03
Latent space injection for capacity expansion
Structured knowledge injected into latent space during inference, without scaling parameters.
Completed PHASE 04
Activation-based chain-of-thought extraction
Reasoning drawn from the model's own activations instead of imposed prompt structures.
Largely complete PHASE 05
Implicit relation engineering & manifold geometry
Meaning as trajectories on a curved surface rather than distances in a flat space.
In development PHASE 06
Associative reasoning via default-mode dynamics
Controlled traversal of concept space beyond the immediate task.
In development PHASE 07
Cultural resonance & contextual relativity
The same concept interpreted through different cultural lenses.
In development
04 — Limbic-2
Emotional loads as an inter-module protocol.
Limbic-2 is the current emotional engine. Its predecessor, Limbic v1, was retired and archived; the present design goes beyond representing affect and doubles as a communication protocol between cortices. In the main system, parallel auxiliary computations run during inference across the later transformer layers — where abstract patterns have already formed — and the contextual signal extracted there is analysed on valence, arousal and dominance. The dominant context is amplified, alternative contexts are kept as controlled deviations, and the result is re-expressed as thirteen neurochemical values.
Each cycle integrates with the previous one in a way that lets older cycles fade gradually rather than averaging them away, so the state has memory without being stuck. The output is a set of emotional loads that every other module is normalised against.
Direct effects
Inside the architecture.
Emotional loads guide internal learning, latent injection and activation steering; they shape activation-based reasoning, default-mode association and cultural resonance. Weights produced by the model are deliberately modulated with these loads, triggering different probability protocols and shifting the overall reasoning flow.
Indirect effects
Thresholds for everything else.
The same values set the thresholds for memory synchronisation, arousal regulation, salience filtering, episodic updates, contextual persistence and logical consistency — and for any external module a developer attaches. The system stays in balance because every operation is computed relative to its current state.
Classified
Affect → neurochemistry weighting
The mapping that turns valence, arousal and dominance into thirteen channel levels, and the coupling between those levels and generation parameters, are withheld in this release.
DA v·a·d ███ · 5HT ███ · OXT ███ · AVP ███ · END ███ · EPI ███ · NE ███ · CORT ███ · T ███ · E/P ███ · GABA ███ · GLU ███ · PRL ███
Language models typically process information in a flat, Euclidean space where distances are straight lines and activation spreads globally: when one concept lights up, distant and irrelevant concepts are pulled into the computation too. A manifold organises information along a curved surface. Points that look far apart in vector space can be close along the surface, and what matters is proximity along it.
The cortex keeps two such spaces in parallel. A state computed in one is not copied into the other as raw data; it crosses as an emotional context and a priority signal. Each point interacts only with its local neighbourhood, so the system reasons over a small relevant region instead of the whole space — which is also how the cost of manifold methods is kept down. Model weights stay fixed; only the path the data takes is curved.
Manifold A
Directed semantic re-mapping.
A semantic core is extracted from internal activations and projected along directions that correspond to different conceptual or cultural frames, then mapped back to text. Abstractions emerge from relational convergence rather than from memorised sequences.
Manifold B
An isomorphic emotional twin.
Same geometry, different job. Emotional loads from the current input, recent dialogue and episodic history are mapped onto every point of A. When accumulated load crosses a threshold, B can redirect A's reasoning trajectory.
On the phone
Manifold memory in M1.
The mobile cortex keeps every record in two parallel spaces. When a topic comes up, emotionally intense records close to it come forward, and the Reflection takes them into account — with a ceiling on how strongly that shows.
Chain-of-thought prompting asks a model to write its reasoning out. That improves local coherence but stays at the level of text, and it remains tied to the distributions of the training data. In the main system, reasoning is grounded in the model's real-time activations: the cortex observes which semantic relations the model itself activates and raises their neighbouring clusters into the active context. Retrieval is not a single step before inference; targets are re-evaluated as decision-layer activations evolve, tying vector proximity and decision dynamics into one flow.
In the emotional engine, the trigger for this mode is chemical: when the glutamate-analogous channel crosses its gate, chained reasoning engages; when the prolactin-analogous channel crosses its own, the loop is closed. No prompt tells the model to "think step by step".
Benefits
Faithful, controllable, debuggable.
No weight updates, no fine-tuning; the architecture monitors existing representations and builds relational structure on top of them. Particularly suited to research-heavy domains and to agent reflection phases that need adaptive context reconstruction.
Open challenges
Stated plainly.
Activation-guided selection can drift into confirmation bias if early anchors over-constrain retrieval. Monitoring adds latency, mitigated by parallelism. Quality depends on the embedding pool behind it.
07 — Capacity & context
More knowledge without more parameters.
Latent injection · L2
Knowledge placed where the model thinks.
Instead of storing information in weights or passing it as raw text, structured knowledge is injected into latent space during inference, where it interacts with internal representations as if it were already encoded. Core parameters remain unchanged, so cost and instability stay low.
Context density · M1
Hidden context on a phone.
Without access to a model's internals, the mobile cortex arranges data on the device with small embedding models and injects it as hidden context. Concepts that sit far apart in the model's meaning space are brought into one window — the indirect route to the same effect.
Analytical rigour and associative reach, decoupled and re-coupled.
Richer relational training makes models more creative and less consistent. Most systems settle on a compromise. The cortex separates the two: an analytically oriented layer produces structured reasoning and extracts conceptual anchors; a specialised associative layer, trained on deliberately dense cross-domain relations, expands only within those anchors; the analytical layer then re-grounds the result. Expansion mode is entered only when synthetic affective signals cross their thresholds.
Emotion-gated
Moments of depth without persistent instability.
Because the creative layer fires on affective thresholds, enrichment appears spontaneously where context calls for it — not on every turn.
Restricted
External MoE experts
Completed. Information access restricted for commercial confidentiality.
09 — Cultural relativity
Meaning is situated, not averaged.
Training dynamics push culturally contingent concepts — legitimacy, respect, authority, family, freedom — toward one dominant statistical interpretation. The result is abstraction loss: the model stores an average where a society has a frame. The cortex targets the relational geometry around a concept, reshaping how activation propagates through its neighbours so that interpretation shifts with the active cultural resonance profile. Emotional loads keep the module dormant unless a dominant perturbation calls for it.
In Generation Network, a first consumer-facing expression of this idea is the Time Machine: an idea is read through how different historical periods would receive it.
10 — M1 · the mobile cortex
L1.5: the leanest build, by necessity.
The main system connects to open models and reads weights during inference to synthesise its neurochemical state; it can then steer the model's geometric latent space directly. A phone cannot carry that processing volume, and the mobile build was designed to keep personal mental models on the device. So M1 removes a large part of L2 and re-engineers the rest.
State without the model's weights. A predefined weighting route with an adapted dominance tone replaces weights read from inference. The evaluation system is similar; the advantages of model-derived weights are given up.
Steering without access to internals. Small external models embed data on the device and steer its arrangement locally; hidden contextual information is injected to shift the semantic space. Results are close, especially for semantic-space shifts, though not identical to L2.
Emotion-triggered recall. When certain emotional states are triggered, short inferences are retrieved from local memory, selected by an emotional recall ratio alongside cosine similarity. Close-but-unrelated records can join associatively, the way an unrelated memory surfaces mid-conversation.
Slow learning by design. Background learning runs whenever the phone is idle and yields to the user immediately. Dedicated components watch battery and memory.
The outcome is not L2 on a phone. It is a system that reaches several of the same effects indirectly — and does far more than an average chat layer. Every M1 module is listed in the Cortex Atlas.
11 — Position
What this is, and what it is not.
It is
A formal emulation of mechanisms.
An attempt to abstract, mathematically, the functional processes that give rise to reasoning in biological cognition — learning, using what was learnt, adapting, solving problems — and to unify them under one architecture that is open in two directions: special-purpose "brain regions" for specific needs, and broader cognitive capability on the same infrastructure.
It is not
AGI, a mind, or a feeling machine.
The project does not aim to build artificial general intelligence or an independent intelligent system. Its neurochemistry is a set of mathematical models. Benchmarking is ongoing; claims on this site describe design intent and internal observations.